Sentence examples for most overrepresented genes from inspiring English sources

The rank and P-value computed by ErmineJ were used to calculate the most overrepresented genes.

In particular, transcripts belonging to the PKA signaling pathway, such as PDE3B, PDE4A and PDE4D phosphodiesterases, turned out to be the most overrepresented genes in such list, with differential expression patterns, which were confirmed also in the additional set of paired diagnosis-relapse BCR ABL1-positive ALL samples analyzed with Human Exon 1.0 ST array.

In the list of the 5 most overrepresented genes in CA3 we find Bok, pvrl3 and for CA1 penk.

Subsequently, the corresponding table of terms with test statistics, pie chart, bar chart, and concept network of interaction and heatmap of most overrepresented genes featured in each of the ontology categories is generated.

A role in apoptosis is suggested by the observation that the most overrepresented gene in endometrial CD14+ cells was GZMA.

The major intrinsic proteins or aquaporins were the most overrepresented gene family among down-regulated genes in both short fiber mutants (Table  2).

A search for annotated enrichment of the differentially expressed genes for specific biological processes (GO Biological Processes, Expression Analysis Systematic Explorer score < 0.05) indicated that 'development' and 'cell cycle/M-phase' were the most overrepresented functional gene categories.

The most prominent overrepresented gene expression features in our dataset pointed toward (changes in) basic cellular functions and disease.

To identify the influence of each gene on the integrin signaling pathway, which was the most overrepresented pathway, a gene plot was produced using the gene set determine from the global test.

In the analysis using DAVID, the most overrepresented class included genes encoding membrane proteins, often targeted to the ER, where sterol biosynthesis takes place in prototrophs (Group 1, in Table 4).

Most of our overrepresented genes provide congruent support from the tips to the base of the node of interest, minimizing the risk that new, additional taxa cause a major shift the nodes at which those genes are overrepresented.