Sentence examples for most likely haplotypes from inspiring English sources

The first simulation scenario (Scenario 1) was one in which the reference haplotypes for the sequenced samples was determined using the most likely haplotypes produced by fastPHASE [24].

Based on the above information we constructed the most likely haplotypes of CYP2C8/9 (Table 3).

We used Haploview to determine the most likely haplotypes in cases and controls.

However, published methods for haplotype assembly [ 8] also assume a uniform diploid genome and simply attempt to identify the two most likely haplotypes.

Phase V.2.1.1 29 30 was used to calculate the most likely haplotypes and diplotypes for the investigated ERCC1 polymorphisms in melanoma patients and healthy subjects.

When there are multiple optimal solutions, data on multiple individuals may be used to infer the most likely haplotypes for each ambiguous individual.

Experimentally-derived haplotypes were found, as expected, to be not always identical to the most likely haplotype, as mathematically inferred from SNP genotypes.

Hence, the individual haplotype can be estimated from the posterior distribution by choosing the most likely haplotype reconstruction for each individual.

First it uses the localized haplotype cluster model to cluster haplotypes at each marker and then defines an HMM to find the most likely haplotype pairs based on the individual's known genotypes.

The most probable or most likely number of haplotypes Cim* is derived by categorizing Him* into the most likely haplotype pair for each individual with Cim* indicating the observed number of copies of the haplotype hm, thus returning to the discrete space, Cim*∈{0,1,2}.

Haplotype imputation by expectation maximisation was performed in PLINK to produce the most likely haplotype calls.