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The table shows the eight most frequent transcript classes targeted to specific sites, with all allelic homologs grouped together.
The most frequent transcript encodes the F10 eggshell protein, followed by a pol-polyprotein transcript, heat shock protein 86 and 14-3-3 14-3-3 14-3-3og (see Table 1 for a list of the toproteinanscripts).
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Thus, the transcriptome data have rounded the picture of the most frequent transcripts of this particular piscivorous cone snail species.
In both organ types, the most frequent transcripts functioned for protein synthesis, protein degradation, photosynthesis, stress responses, TFs, and DNA synthesis.
As seen, the most frequent individual transcripts correspond to genes involved in maintenance and basic metabolism.
The same heptanucleotide motifs predominated in cucumber clustered ESTs, except for AAAATTT, whereas repeats of AAAAAAAG, AGAGAGGG, AAAAAAAC, and AAAGAGAG were most frequent among transcripts octanucleotides.
The top 20 most frequent unique transcripts in the cDNA library of the 4-year old P. notoginseng root were shown in Table 2.
The DNA sequence analysis revealed that the most frequent (50%) transcription start of TMPRSS2-ERG fusion transcripts is at +5, relative to the wild type TMPRSS2 promoter +1 position.
This represents the normal and most frequent use of constitutive transcripts or isoforms in different tissues.
Finally, we assigned to each transcript the most frequent gene symbol from the corresponding BLAST alignments to multiple species.
Our finding that dinucleotides were the most frequent repeat motif in white shark transcripts irrespective of transcript region is typical for a wide range of taxonomic groups including other vertebrates [ 41].
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