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To ensure the most comprehensive gene model possible, clean reads were also mapped to the genome sequence assembly of A. niger CBS 513.88 genome from NCBI.
This study represents the most comprehensive gene expression analysis of cervical tissue reported to date.
Our work represents the most comprehensive gene expression profiling of an endosymbiotic bacteria in its native host context to date.
The GUDMAP website provides free access to the most comprehensive gene expression dataset of the GU system in the developing mouse.
The curatedOvarianData database is the result of a focused effort to enable meta-analysis of these studies and to provide the highest quality and most comprehensive gene expression data resource for any cancer.
The two most comprehensive gene expression profiling studies related to the placenta used microarray analysis to characterize four different components of the human placenta in 76 individuals [ 10] and the mouse placenta over the whole course of pregnancy [ 11].
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The 16S rRNA gene qualifies as the most comprehensive single gene database that can be used to classify bacteria phylogenetically.
The Keio collection of single and double gene deletions in Escherichia coli is considered the most comprehensive essential gene study to date [ 43, 69].
Analysis of assembly quality, length and diversity show that this dataset represent the most comprehensive expressed gene catalog for any Eucalyptus tree.
For the latter, source trees were instead derived de novo using sequence data downloaded from GenBank to provide the largest, most comprehensive individual gene trees possible.
The TCGA project [ 54] only provides 23 normal-tumor colon pairs available and we were unable to find a dataset with a more than 50 samples available after an exhaustive search in the most comprehensive public gene expression databases (GEO and ArrayExpress).
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