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Exact(5)
Skipped exon (SE) is the most common splicing abnormality with 40974 events of which 128 events passing the threshold for significance.
As we proposed in [ 1], the most common splicing error in plants is probably a failure to recognize and splice out introns, so IntronR should be the most common AS type.
The most common splicing variants resulted in either a slight deletion or extension of the N terminus, thus adding diversity to an already rapidly evolving domain of CenH3, while the least common splicing variants resulted in nonfunctional protein predictions.
Although splicing variant 1 is the most common splicing in both strains (70% in GIII and 44% in Oregon-R), the relative contribution of different subfamilies to each variant is different in both stocks.
The most common splicing events that we detected by comparison of junction reads were those in which multiple exons were spliced out of the middle of genes, such that the first one or two exons were joined to the last or next-to-last exons, producing a transcript with little or no coding sequence.
Similar(55)
The most common splice sites, GT-AG, GC-AG, and AT-AC, are found in 98.3%, 1.5% and 0.2% of human introns, respectively [7].
C. elegans operonic genes also have a different preference of the 20 most common 3' splice sites compared to non-operonic genes.
Furthermore, at least with cDNA arrays, most transcripts were only represented by the most common splice variant making the gene expression estimates unspecific [ 10].
We also studied frequencies of four most common alternative splicing patterns in the bear ESTs sequences [ 32].
In humans, the allocation is quite different from Arabidopsis: the most common alternative splicing variant is exon skipping 42-588%), whereas intron retention forms only a small fraction (5-95-9%f alternativetive splicing events [ 5, 26].
Primers to amplify the UTRs used in this study were based on the RNA-seq data to represent the most common UTR splice variant in RPE-1 cells.
Related(20)
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