Molecular analysis and, in most cases sequencing of more than 1500 repair events on a variety of NHEJ substrates in wild type and pol μ−/− mouse embryonic fibroblasts shows that, unexpectedly, the absence of pol μ decreases the efficiency of joining of all types of DSBs, including those that do not undergo end-processing.
In all cases the best match retrieved the plant species, either as the same plant species sequence as query sequences or as the nearest plant species (e.g. in most cases sequences of Indian Berberis species were not available in data base and B. thumbergii showed the best match).
In most cases sequencing and annotation errors are likely to inflate estimates of change; however, the simple method we have used to count differences in gene number is fundamentally conservative because we are unable to account for instances where both gains and losses occur within a family along the same branch of the tree.
In most cases, sequences within 3'-UTRs were used to verify that EST sequences described the same eIF4E-family member.
In most cases, sequencing data are made publicly available immediately after generation and often before the data generators have completed their analyses.
Furthermore, in most cases, sequences identified as non-recombinant were not representative of the different suid species available in our dataset.
Analyses of CRN subfamilies show that, in most cases, sequences from Bd form a distinct clade whereas those from oomycetes form another, suggesting independent HGT for each CRN subfamily.
These trees allowed us to visually assign OTUs as sequence clusters which, in most cases, encompassed sequences from several subjects, and consensus sequences were generated for each OTU.
In most cases, additional 3' sequence was obtained.
In most cases, each sequence read unambiguously matched a single KIR allele, providing typing resolution to the allele level.
