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Disinfection by-products were studied most (Additional file 1: Table S5).
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Second, we reanalyzed the same dataset used by Goremykin et al. [ 19] and found that methods that account for rate heterogeneity across sites [ 61, 64- 67] put Amborella sister, usually with high BS (Figs. 2J, 3B, 4B, 4C, and 5; also see most Additional files).
Optimal efficiency (in terms of saved molecules) is achieved when the concentration of the most abundant type decreases most [see Additional file 2].
Most PCGs displayed ATN start codons, with ATG and ATT as the most frequent (Additional file 3: Table S1).
Most Gammaproteobacteria (Additional file 1) found in carp belonged to the Aeromonas group.
Nevertheless, an ANOVA test confirms that the two factors identified by the stepwise regression are the most significant (Additional file 1: Appendix C).
Further analysis showed that 57.3%9898 out of 171) of SNP-miRNAs have produced only one new mature miRNAs each, whereas the remaining miRNAs have two or more new variations, with the osa-miR2124h being the most (8) (Additional file 5).
In the metabolism overview, cell wall organization and modification (48 genes), lipid metabolism (10), and metabolism of major carbohydrates (9) were the most common (Additional file 1: Table S5).
Among the KOG categories, "Signal transduction mechanisms" (14.8%) was the most abundant (Additional file 6).
Short SVs (below 50 bp) are the most abundant (Additional file 5: Figure S2).
The polymorphism found in both populations was similar in most cases (Additional file 2: Table S2).
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