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The specificity of this method is high enough to detect sequences more identical than expected between closely related species while controlling for the FDR in the results.
RIP specifically mutates duplications that are longer than 400 bp and more identical than 80%, thus effectively preventing gene duplications and keeping the genome extremely non-redundant (for review see [ 8]).
Moreover, for TE family with a large number of copies, we can expect one or more of these copies to be more identical than expected between the two genomes just by chance.
Previous genome-wide approaches used a wide range of procedures to infer sequences more identical than expected given the phylogeny of the species to detect HTs in eukaryotes (Loreto et al. 2008; Wallau et al. 2012).
We detected 2,651 CDSs, 3,967 insertions from 28 different TE families, and a large number of intergenic DNA fragments (13,806) more identical than expected from the 4,468,121 pairs of sequences identifiable between D. melanogaster and the 2012 version of the genome of D. simulans.
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Other critics pointed out that these experiments relied on the proposition that identical twins experienced no more identical environments than did non-identical twins, when it was abundantly clear that parents were treating their identical offspring more similarly than their non-identical twins.
Therefore, a VM that carry large memory size may contain more identical pages than a VM with smaller memory size.
In the R71 chimera region, the N-terminal half (RyR2 amino acids 4522 4780) is more divergent (65% identical) than the C-terminal half (RyR2 amino acids 4781 4968; 93% identical).
The system looks for patterns in language more than identical words.
84, 85 One small study showed that smoked cannabis improved pain more than identical placebo cigarettes; however, this benefit disappeared after 7 days.
Interestingly, TM1 was much more divergent (only 13% identical) than the other transmembrane helices (TM2 TM4 being 36, 50, and 38% identical, respectively).
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