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Exact(5)
Informally, C EV will find a set of nodes which are more densely connected (clique-like) than other subsets of V. A node with a high C EV score would have relatively more edges between its neighbors.
Finally, for each possible pair of generalized nodes, say G i and G j in the generalized graph G', an edge will be created if and only if there is one or more edges between any two nodes in G from sub-graph G i and G j respectively.
In contrast, in the more recently formed stonewort ecotypes there are more edges between the pigmentation and the morphological traits in both lakes (Fig. 6, Table 5).
The p-value gives an estimate of the probability to observe k or more edges between genes from the given GO-term.
The p-value for the enrichment of this GO-term is calculated from a hypergeometric distribution by (8) p = ∑ i = k m P (X = i ) = ∑ i = k m m i N − m n − i N n The p-value gives an estimate of the probability to observe k or more edges between genes from the given GO-term.
Similar(54)
(2) Note that Q′ R will yield values in the [0; 1] interval only if there are more edges established within than between modules.
Second, IFDSD and ILP always generated pathways in which the intermediate nodes between the source and the target had two or more edges.
The most likely result is a host of significant connections between nodes in the same cluster since they all exhibit more edges than expected by chance.
Indeed, graphs obtained by a growth process appear to show preferential attachment naturally [ 37] (because the oldest nodes usually have more edges than younger nodes) and are fundamentally different from those where edges are placed between nodes probabilistically [ 43].
Since edges are read in ascending order, λ grows as more edges are loaded.
This is done with all edges until no more edges can be removed.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com