Sentence examples for more conserved codon from inspiring English sources

Active TF binding sites within the promoter are indicated by the green FitCons2 class (16, ρ = 0.43), while elevated scores identify the start codon and more conserved codon positions (blue; 07, ρ = 0.67).

This criterion is likely the reason why we found many more conserved codon pairs as opposed to other findings [ 22], where the universal rules were searched only among the first ten most conserved codon pairs in each separate domain.

However, the ∼150 bp directly upstream of the start codon are more conserved than the adjacent, upstream non-coding sequence or synonymous sites in coding regions of the genes (Figure 5).

Forward 3 was designed on the Q6A1C9 sequence, targeting the more conserved region before the start codon between sequences Q6A1C9 and Q6A1D7 obtained from Onobrychis viciifolia and Astragalus monspessulanus.

Dynactin genes were termed pseudogenes if they contain more features like frame shifts and in-frame stop codons and miss more conserved sequence regions than can be attributed to sequencing or assembly errors.

We also tested whether start codon intron positions are more conserved than other intron positions.

In our study, either excluding third codon positions or using more conserved protein sequences with the CAT model still generates long branches for both Zoraptera and Embioptera.

We analyzed the distribution of synonymous codons within plant coding sequences and found that preferred codons tend to encode the more conserved and functionally important residues of plant proteins.

Since ribosomal proteins can be expected to be more conserved than other proteins, we investigated whether the higher conservation of proteins with start codon introns could be solely due to the high proportion of ribosomal proteins.

However, analyses of Hsp90 amino acid sequences produce topologies that are different from those derived from analyses using Hsp90 DNA sequences (excluding the third codon positions), which can be attributed to a more conserved and thus weaker level of phylogenetic signal in the amino acid dataset [55].

Goren et al. (2006) looked for motifs that were more conserved than expected at synonymous sites and enriched compared with background codon usage rates.