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Where the more the shorter distance of joining implies the more clusters are similar.
When SU density is low, most of the SUs may be disconnected from each other and more clusters are formed.
For a higher threshold, more clusters are computed (and hence more similarity computations are executed) than for a lower threshold.
As a result, while larger size clusters are formed in pure Ni, smaller and more clusters are observed in the alloys.
Upon agglomerating, if two or more clusters are detected with at least 4 pairs of matched points linking each other, then the corresponding regions are deemed cloned.
Consequently, if two (or more) clusters are detected with at least 4 pairs of matched points linking a cluster to another, then the corresponding regions are considered cloned.
Similar(36)
For the other two EPIs, more clusters were obtained.
In most cases, calls of two or more clusters were connected by short intervals of silence.
The analysis with MCL provided similar results to MCODE for the large clusters mentioned, although it splits the network in more clusters being the smaller ones more coherent in functional terms that the ones found by MCODE.
Thus, the expected result is that the maximum Δ would be at a single cluster, and that Δ would be essentially a decreasing function as more clusters were added.
Two more clusters were found by grouping two and three herds.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com