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We would argue that monocytes represent the most functionally uniform of the more abundant groups we deconvolved to (excluding eosinophils and basophils) and perhaps this is why we failed to discover any signal in any other cell type.
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As shown in Table 3, partially overlapping genes are in fact more abundant (group 1) or equally abundant (group 2) as randomly picked genes.
Group 1 had increased Klebsiella compared to group 2. The Klebsiella was also more abundant in group 1 than group 3 although it was not statistical significant (p = 0.06, q = 0.36).
Fig. 6 The STAMP analysis of groups A and B. Lactobacillus was more abundant in group A than group B. Although many studies have investigated the gut microbiota composition of poultry, very few have assessed the interactions between HMs and gut microbes.
The abundance of unclassified Clostridiales was shown the negative trend by groups in Fig. 4c and the taxon was also more abundant in group 2 than group 3 although it was not statistical significant (p = 0.003, q = 0.18) in (Additional file 1: Table S3).
At the genus level, Lactobacillus was more abundant in group A than group B (p < 0.05).
Moreover, Romboutsia was more abundant in group B than group A. The reason for this difference may be partially attributed to the different pH of the feed fed to groups A and B (pH 4.96 vs. 4.71, respectively).
STAMP analysis results revealed that Lactobacillus was more abundant in group A than group B (28.61% vs. 13.80%, respectively, p < 0.05), in agreement with the reports by Stanley et al. (2012) and Gong et al. (2007).
Comparison of the mean abundances between groups by the Student's t test showed that the phylum Fusobacteria was more abundant in group 3 than in group 1 (F = 14.44, p < 0.0001).
And complete knockouts people whose two copies of a specific gene are both disabled should be even more abundant in groups in which parents are often related because this increases a person's chances of inheriting the same chunk of DNA from both parents.
Similarly, detailed taxonomic data on some other and more abundant zooplankton groups is lacking in a number of sub-regions of the Baltic Sea [57].
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