Sentence examples for molecular visualization programs from inspiring English sources

PyMol is one of the most popular molecular visualization programs.

Molecular visualization programs broadly speaking allow users to control the presentation of a molecule in virtual three-dimensional space via mouse movements.

Fortunately, the necessary computers are available to many researchers and the needed new generation of molecular dynamics and molecular visualization programs has been developed and these resources are widely shared.

Any of the already mentioned molecular visualization programs (Jmol, PyMOL, and SwissPDB Viewer) are suitable for quantitative analysis of molecular structures.

Since, at present, all molecular visualization programs as well as many other types of biostructural software depend on the PDB format, a three-character code for carbohydrates is necessary.

The second question can be explored by using one of the freely available molecular visualization programs, such as Jmol (Jmol, 2010), PyMOL (DeLano, 2002), or SwissPDB Viewer (Guex et al., 2008).

Trajectories were analyzed using the Ptraj module of AMBER and structures were visualized using the VMD molecular visualization program http://www.ks.uiuc.edu/Research/vmd/ (70).

The structures were visualized, compared and manually superimposed in the molecular visualization program, PyMOL.

Based on the molecular visualization program RasMol, Chime was developed as a plugin for Netscape and later for Internet Explorer and Firefox.

Why not deliver to the reader a coordinate file that can be directly piped into a molecular visualization program for manipulation to the reader's heart's content?

Electronic structure and optimized geometrical parameters were calculated by density functional theory (DFT) using Gaussian 09W software package [10] with B3LYP/6-31 B3LYP/6-31asis set method and Gauss-View molecular visualization program package on a personal computer [11].