Sentence examples for molecular surface of from inspiring English sources
SURFACE (S) is the area on the molecular surface of the protein, CAVITY (C) is the area inside SURFACE that is not INNER, namely, it means a cavity.
f, Molecular surface of EBOV GPCL with the ADI-15946 footprint outlined in orange.
The described subdomain architecture of the UCS domain is also visible when plotting the thermal motion (B) factors on the molecular surface of UNC-45.
On the right is a molecular surface of GPCL with the footprints of each antibody highlighted by selecting all atoms within 4 Å of the Fv.
In (a) and (b), stereoviews represent the footprint of the molecular surface of the BM3.3 and 2C TCR binding sites on the peptide H-2Kbsolvent-accessible surface, respectively.
A significant number of atoms lie buried beneath the "molecular surface" of proteins and other biologic macromolecules.
The experimental characterization of hindered-rotation barriers and mapping the energetic heterogeneity of water molecules bound to the molecular "surface" of proteins is critical for understanding the functional interaction of proteins with their environment.
A comparison of the active-site molecular surfaces of LptE, PETase and MHETase in their substrate-bound states illustrates a higher solvent accessibility of LptE and PETase, which is partially related to the induced-fit mechanism observed for MHETase and the number of residues contacting the respective substrate (Fig. 2c, d, Supplementary Figure 5 a d).
Numerical experiments are carried out to complex interfaces, including the molecular surfaces of a protein, a missile interface, and van der Waals surfaces of intersecting spheres.
To our best knowledge, this is the first elasticity interface method that is able to deliver the second convergence for the molecular surfaces of proteins.
The molecular surfaces of SufC and the C-terminal helices of SufD (PDB code: 1VH4) suggest that the unusual linker conformation conserved among SufC proteins is probably suitable for interacting with SufB and SufD.
