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This sequencing-based physical map indicated that 117 new segments were detected; almost all were shorter than 3 Mb and were not apparent in the molecular marker map.
The technology was applied in identifying 21 SBP markers for some of the marker-poor genomic regions of the Arabidopsis molecular marker map that represent polymorphisms between ecotypes, Col-0 and Nd-0.
The two cultivars are characterized by a significantly different WUE [ 16, 17], an Ofanto x Cappelli RIL population has been implemented with a molecular marker map [ 19, 20] and it is currently used to map some WUE-related traits [ 18].
A RIL segregating population with a corresponding molecular marker map has also been developed from the cross between Ofanto and Cappelli [ 19, 20] and used to localize QTLs for leaf porosity and chlorophyll content in field conditions [ 18].
There were 117 'new' segments detected with whole genome re-sequencing that were not apparent in the molecular marker map; each of these newly revealed segments was shorter than 3 Mb.
The details of the Ofanto × Cappelli molecular marker map will be published separately; in the present study, only the 4BS linkage group carrying the Lpx-B1 loci is presented.
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Conventional molecular marker maps from diploid A and B genomes and cultivated peanut × induced allotetraploid RIL populations.
Conventional molecular marker maps (Supplementary Data Set 2) and syntenic inferences were then used to refine the ordering of scaffolds within the initial genetic bins.
A number of molecular marker maps have been generated for Prunus species, some with reasonably complete coverage of all chromosomes.
Molecular marker maps, the necessary framework for any MAS programme, have been constructed for the majority of agriculturally important species, although the density of the maps varies considerably among species.
Polymorphisms detected by various marker technologies have been used to generate molecular marker maps of those species that do not have any genome sequences and physical maps.
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molecular connectivity map
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molecular cancer map
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