Sentence examples for molecular graphics program from inspiring English sources

PyMOL [4] is a widely used molecular graphics program, which has evolved into a platform for several plugins that use its versatile visualization capabilities.

For molecular modeling the PyMol molecular graphics program was used.

Inspection of the crystal packing using the molecular graphics program COOT [58] revealed that there was space for additional molecules.

All sequence-based backbone alignments were preformed using the molecular graphics program, Friend [74] and structure-based alignments were achieved with the Calpha-based algorithm, Topofit [75], also present in Friend.

The obtained model was further checked using the molecular graphics program COOT [ 56].

The molecular graphics program Coot (32) was used to superpose the three structures.

d) Projects include: interactive 3D illustration about macromolecules using kinemages or other molecular graphics programs, often with short, non-interactive introduction.

This makes a great advantage since XYZ file format is the most accepted chemical file format in molecular graphics programs, so those programs can interpret the initial portion of the luscus file as XYZ file.

One of the most well-developed HTML5 molecular graphics programs is ChemDoodle [20], which has web components for drawing of two-dimensional structures and viewing of three-dimensional structures.

The final structures of Int188 and IntN916Y were checked for geometrical correctness with PROCHECK[32] and analyzed and compared with EPEC intimin-α (PDB 1F00) using programs from the CCP4 paskage[33] as well as the molecular graphics programs Coot[34].

The intuitive and easy-to-use interface has been designed to facilitate the analysis of structural features, even if the user does not have any previous experience in molecular graphics programs.