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Large diversity in molecular function was found both in CD- and WA-related proteins based on the annotations in Brachypodium protein sequence database (version 1.2, http://www.brachypodium.org).org
Topping the list of upregulated transcripts in this category of molecular function was RECK.
For the construction of the pie graph, the first molecular function was chosen.
For this purpose a Directed Acyclic Graph (DAG) rooted at "biological process" (one of the 3 GO categories with "cellular component" and "molecular function") was produced for transcriptomes of both species (Figure S1).
Although the list of identified proteins only includes a limited number of entries, GO term enrichment helped elucidate whether one specific category of biological and/or molecular function was particularly altered in the experimental model under analysis (Table 2).
The most enriched category within Molecular Function was alkaline phosphatases.
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The functional enrichment maps of biological process and molecular function were shown.
OsSPR1 encodes a mitochondrial protein with an Armadillo-like repeat domain, but its precise molecular function is uncharacterized.
Another identified molecular function is GABAA receptor activity.
This gene has not been cloned and thus its molecular function is unknown.
However, not all aspects of molecular function are equally dependent on structure.
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