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It may seem straightforward to use a molecular dating method to either accept or reject the possibility of a recent human influence in the origin of the allopolyploid CD genome.
Secondary calibration points generated by these previous Annonaceae studies were avoided as a different molecular dating method and calibration points were employed in this study.
The large amount of combinations of parameters influencing age estimates limits straightforward explanations of these differences with previous studies (e.g., topology used [ 46]; fossil species and priors used to define and model age constraints [ 47]; molecular dating method [ 13]).
Although the methodology and assumptions implemented in each molecular dating method can be readily compared, our knowledge of how time estimates are influenced by the choice of method is still poor.
The molecular dating method gave the divergence between the two main subgenera of Alnus at the Eocene (around 48,6 My ago), and the original split between A. cordata and the A. glutinosa- incana complex at the Oligocene (around 22,9 My ago; Figure 1).
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Chapter 2 contains two additional sections after the summary Appendix 2.1: Molecular Dating Methods and Appendix 2.2: Phylogeny Estimation.
This makes very difficult to date the formation and the diversification of the CD complex by molecular dating methods.
We investigate the effect of such assumptions using different molecular dating methods.
Over the last decade, molecular dating methods have been among the most studied subjects in statistical phylogenetics.
All molecular dating methods must specify some form of prior assumptions about both divergence dates and molecular rates.
Recent progress in molecular dating methods nevertheless would allow for establishment of uncertainties in fossil calibrations [ 18, 76].
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molecular fingerprint method
molecular clock method
molecular docking method
molecular diagnosis method
molecular coancestry method
molecular replacement method
molecular dating analysis
molecular genotyping method
molecular orbital method
molecular sensitivity method
molecular similarity method
molecular identification method
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