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It is found that the same-direction electron transfer path perpendicular to the molecular axis of ladder-type polydiacetylenes can increase their first hyperpolarizabilities, while the electron transfer path parallel to the molecular axis can effectively increase their second hyperpolarizabilities.
Within the crystal, the molecules are strictly aligned in stacks along the C3v molecular axis of symmetry, at a distance of 6.0 Å and with zero mutual turn along the axis.
A strong dimer of [ TCNQ 2]2− is formed, and the adjacent dimers slide to each other along the direction of the shorter molecular axis of TCNQ− in 1 4.
The long molecular axis of PFP might align with either, yielding a total of 24 orientations, of which only 12 are distinct.
Time-dependent DFT calculations show that the electronic transition dipole moment is highly aligned with the long molecular axis of the dye.
For αSyn-induced cell death in particular, where the lethal role of mitochondria has been clearly established, the molecular axis of toxicity might therefore converge in this organelle.
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These observations are explained by the action of two newly recognized phenomena: a) the correlated helical twist of molecular axis in the segments of the infinite interpenetrating networks, and b) the percolation through mm-sized domains of uniform helical sense carried across the network through matching of molecular orientation twist sense at network junctions.
Based on the simulated XRD-PF diffraction peaks, the long needle axis (LNA) and long molecular axis (LMA) orientations of B orientated fibers have been deduced and are presented in Figure 4 by solid filled arrows.
The long molecular axis was defined as the axis of minimum moment of inertia, which was calculated for each component molecule of E7.
For this orientation, the molecules adopt a lying arrangement (see Figure 2e,f) where the long molecular axis encloses an angle of approximately 8 ± 2° with the Cu[1̅10] direction.
Figure 7 shows the optimised structure of the dye overlaid with the orientation of the calculated TDM for the allowed visible transition (shown in red), along with the orientation of the long molecular axis (shown in blue), calculated here as the minimum moment of inertia axis.
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