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The two model outputs considered for SA correspond to the molecular amounts of mono- and poly-ubiquitylated PCNA isoforms.
This column specifies, in particular, the molecular amounts of proteins occurring in the initial state of the system.
The molecular amounts of the proteins initially occurring in the PRR model are here expressed as number of molecules per cell.
The rates of ammonia elimination were established by calculating the changes in absolute molecular amounts of ammonia in the medium and corrected for time and cell number.
Then, from the outcome of stochastic simulations we derived the molecular amounts of PCNA isoforms (denoted by # PCNA sim Ub u, where u=1,2,3 corresponds to the three ubiquitylated isoforms).
Since the model describes a process taking place inside the nucleus, the molecular amounts of the PRR proteins that are localized both in the nucleus and in the cytoplasm (Rad6, Ubc13, Mms2 and ubiquitin) had to be scaled to the nuclear portion volume.
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The molecular amount of each element should be indicated in subscript beside its respective element's symbol for all amounts greater than one.
The amount of ubiquitin is calculated as the sum of molecular amounts deriving from the four genes coding for ubiquitin in yeast cells (namely, UBI1, UBI2, UBI3, UBI4).
The derived molecular amounts (expressed as number of molecules per cell) of the proteins occurring in the initial state of the PRR model are reported in Table 2.
Copolymerizing BAF PAES with increasing molecular weight amounts of PDMS results in tensile properties ranging from plastic to elastomeric where the elongation is 417% for a segmented block copolymer with 64 wt% PDMS incorporated.
With the development of medical informatics and molecular biology, vast amounts of biomedical data have been accumulated.
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