Sentence examples for modules were visualized from inspiring English sources
Modules were visualized as discrete colors and gene alteration frequencies were visually resized in proportion to alteration frequency across the 84 analyzed GBM cases.
(C) The hub genes in the Turquoise and Gray modules were visualized by Cytoscape.
The generated network modules were visualized in the software environment Cytoscape [23].
The pathogenic network and modules were visualized with Cytoscape (http://www.cytoscape.org/).org/
The modules were visualized by classical multidimensional scaling in three dimensions.
The enriched protein interaction network modules were visualized using String network online analysis (http://www.string-db.org/newstring_cgi/show_input_page.pl UserId=nXWzWNEgLwwF&sessionId=Gfs9PMrT96ZB).pl UserId=nXWzWNEgLwwF&sessionId=Gfs9PMrT96ZB
The networks from representative modules are visualized in Cystoscape [ 81].
Finally, the shape variation corresponding to the association between modules was visualized using Partial Least Squares (PLS) analyses [ 54].
The module was visualized by Cytoscape software [ 54].
The effect of diagnosis on gene expression was evident when gene expression in the salmon module was visualized directly.
Trajectories were analyzed using the Ptraj module of AMBER and structures were visualized using the VMD molecular visualization program http://www.ks.uiuc.edu/Research/vmd/ (70).
