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These modules were enriched with the genes relevant to cell cycle and immune response.
Other coordinately expressed modules were enriched for lymphoid and/or myeloid signature transcripts and genes induced by IL-17 in keratinocytes.
A comparison to the results of Wong et al. (2008) [6] demonstrated that the homolog modules were enriched for modules of higher recurrence than the modules reported in the Stemness Module Map (Figure S3).
Thus, dioxin-enabled modules are enriched in links that appeared only in the treated condition (e.g., Fig. 2E), and dioxin-sensitive modules were enriched in links observed only in the normal condition (i.e., were vulnerable to disruption by dioxin).
These modules were enriched in DNA damage repair and stress response genes (Kriete et al., 2011).
Several SI-associated co-expressed modules were enriched for genes differentially expressed between groups.
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Fifty-four modules are enriched in targets of one or more TFs, and 39 modules show enrichment of both GO Biological Process categories and TF binding sites.
Conserved modules are enriched in genes associated with ASD, supporting the utility of phNPCs for studying neuropsychiatric disease.
Both modules are enriched with the function of binding but tend to bind with different molecules.
GO analysis identified unique biological or molecular functions for each gene network; the transcripts, their corresponding modules, and the functional categories for which the modules are enriched are listed in Table S5.
These modules are enriched of the TFs such as SRF, STAT1 and H3K27me3.
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clusters were enriched
contents were enriched
modules were loaded
modules were found
modules were comprised
modules were introduced
modules were inserted
modules were considered
modules were ranked
modules were identified
modules were evaluated
modules were modified
modules were tested
modules were designed
modules were inferred
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