Sentence examples for modules we used from inspiring English sources

However, in most of these cases, prior comparisons involved only two modules (we used four).

To obtain an unbiased estimate of the generalization error of the different sets of modules, we used a double-loop cross validation procedure [17].

To visualize representative modules, we used Cytoscape [ 33].

For each DiffCoEx and Similarity matrix modules, we used mummichog to test for metabolic pathway enrichment.

To find consensus modules, we used the consensus dissimilarity measure (Eq. 22) and average linkage hierarchical clustering.

To calculate the significance of the co-expression differences within and between modules, we used permutation testing.

For the speech recognizer and the semantic analysis modules, we use software developed by IBM and CSLR Center for Spoken Language Researchh at University of Colorado), respectively.

However, to synchronize the SIPO and the Lorenz_Generator modules, we use a 1-bit command signal (cm).

For easier interpretation of the relationships between expression and methylation modules, we use the same module labels for modules that show significant overlap.

(ii) KEGG-metabolic To represent decomposition into metabolic modules, we use 67 human metabolic networKEGG-metabolic Toh representing a single functional modecomposition

To analyze the evolution of regulatory modules, we use a new algorithm, Arboretum (Roy et al., 2013), to identify expression modules across species and to reconstruct their evolutionary history.