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However, to synchronize the SIPO and the Lorenz_Generator modules, we use a 1-bit command signal (cm).
For the speech recognizer and the semantic analysis modules, we use software developed by IBM and CSLR Center for Spoken Language Researchh at University of Colorado), respectively.
(ii) KEGG-metabolic To represent decomposition into metabolic modules, we use 67 human metabolic networKEGG-metabolic Toh representing a single functional modecomposition
For easier interpretation of the relationships between expression and methylation modules, we use the same module labels for modules that show significant overlap.
In our modules, we use experimental designs developed during ongoing undergraduate research projects as a model system to explore basic botanical concepts (community ecology, taxonomy, physiology, and population genetics) and develop experimental analysis skills.
In order to determine the set of N_R nodes to be released in modules, we use a simple rule by first sorting nodes with non-decreasing indices and then assigning higher priority to nodes with smaller indices.
Similar(53)
To obtain an unbiased estimate of the generalization error of the different sets of modules, we used a double-loop cross validation procedure [17].
To visualize representative modules, we used Cytoscape [ 33].
For each DiffCoEx and Similarity matrix modules, we used mummichog to test for metabolic pathway enrichment.
To understand the biological meaning of the consensus modules, we used functional enrichment analysis using gene ontology information [ 20].
To calculate the significance of the co-expression differences within and between modules, we used permutation testing.
Related(20)
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