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In this way, the resolution increases slightly and the algorithm can better detect less-separated modules or submodules.
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Signals are normally used to connect between pins of different components or to interconnect modules with submodules.
If any of these top-level modules contains submodules, then these are shown as embedded blocks in the floor plan.
LEAP learns feasible ways of decomposing circuit modules into submodules, as well as the recommended method when there are competing feasible decompositions.
Changing the number of modules and/or submodules yields retrieval results that are significantly correlated with the reported ones.
Next, we studied how the modules combine submodules.
For succinctness, we show only the NDCG results of the best-performing combination of modules and submodules; the results for alternative number of modules and submodules are shown in Supplementary Figure S4.
Finally, the retrieval results obtained by our method are robust with regard to the number of modules and submodules.
Of 205 pathway modules containing submodules, modules grouped into pattern A account for only 11.3% (Table 1) and mainly belong to the categories of central carbohydrate metabolism and cofactor and vitamin biosynthesis.
Of the 263 structural complex modules containing submodules redefined from modules with various complex patterns, 119 modules were categorized into pattern B (45.6%) and 95 were rare modules (Table 1).
Supplementary Figures S1 and S2 display the associations between enriched functional categories as described by gene sets and modules and submodules, respectively.
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