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We form the list of candidate modules obtained from all one- and two-edge removed processes.
These transcription factors are important because not only do they link the gene regulation map with the protein-protein map as shown in Figure 2, but they also link different modules obtained from the decomposition of the map.
For each GO_BP term, the number of modules obtained from WGCNA was assigned to K-means.
All unimodular proteins, including the modules obtained from multimodular proteins, were tested pairwise for sequence similarity.
These plots show that the enrichment scores of targets genes in the miRNA modules obtained from this study are statistically significantly higher than those from previous study.
We also confirmed that the PCR was able to detect virus in the lung modules obtained from animals succumbed of the disease.
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As an example of the hierarchical structure of gene modules generated with SSIM using different preference values, one of the module obtained from the "12-module set" representing various "transport" functions is split into two groups, based on the membership of "18-module set", showing slightly different expression profiles.
The Z-summary statistics of modules obtained against bootstrapped networks from the individual dataset from Gene Expression Omnibus (GEO).
However, the quality of the modules obtained in that study suffered from the small number of samples and noisy input data.
(8) Motifs included in functional module = number of motifs included in a functional module number of all discovered subgraphs In our experiments, the database for protein complexes and functional modules are obtained from MIPS [ 34] server.
Two sets of horizontal and vertical modules are obtained from a prototype model, while an evolutionary solver function is applied in reducing the generated construction waste volume.
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