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By the same token, the same experiment could also repress differentiation modules to the exclusion of stemness modules detected in the negative list and therefore receive an extremely negative SE(Q−).
POZ/BTB domains are widespread modules detected in a variety of different biological contexts.
In contrast, of the eight modules detected in Synechococcus sp. WH8102, only two modules show such pathway-specificity.
The globally co-expressed gene modules detected in the networks may serve as a basis for more extensive studies of genes and modules of interest.
The results indicate that the modules detected in the leaf mimicry pattern are established by a combination of coupling and decoupling the NGP symmetry elements.
We systematically compared modules detected in the coexpression networks in fasting and fed states with respect to differentially expressed or connected genes.
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The N-terminal module (ORF01388a) appears more closely related to the GH family 5 module detected in ORF00389 and ORF02868 and map together with known endoglucanases from R. albus and R. flavefaciens strain 17, whereas the C-terminal module from ORF01388 (ORF01388b) appears more closely related to the module detected in ORF00227, both of which are predicted mannanases.
Weighted genes co-expression network analysis reveals a similar distribution along the modules detected both in normal and preeclampsia conditions.
Enrichment for differentially expressed genes, functional categories, and cell type-specific markers in coexpressed gene modules detected by WGCNA.
Surprisingly, a mere 3 copies of dockerin modules were detected in the rumen metagenome (Table 3), which is most likely due to the rarity of cellulosome-based systems for plant cell wall degradation within the rumen community and the limits of the short pyrosequencing read lengths, as described by Brulc et al [53].
Recently, core modules were detected in the GBM data without using CNV information [ 49].
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Justyna Jupowicz-Kozak
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