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The AAA1 and AAA2 modules contain the Walker A and B consensus motifs that are critical for ATP binding and hydrolysis, respectively.
The available modules contain the kanMX6 or natMX6 dominant markers, allowing selection for cells resistant to the antibiotics G418 or nourseothricin (NAT), respectively [26], [28].
Thus, it seems likely that some promoters contain enhancer-like modules (in addition to the core region) and that these modules contain the Class 2 motif pairs.
Having identified 3 functionally similar modules in the three different datasets, we assessed whether these same modules contain the same information as the entire network.
Here, we will mainly focus on SAT modules 4 and 8, because these two modules contain the largest number of genes, making it more valid to identify over-represented pathways in them.
In most class C GPCRs, these modules contain the binding site for natural amino acids or derivatives and ligand recognition is dependent on a consensus motif of 8 residues that participate to the binding of the α-amino acid functions (i.e. primary amine and carboxylic acid) [ 24].
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Each of these modules contains the living and working areas and, just like Ross' 1949 concept, would spin around the central axis to generate artificial gravity.
For example, the module E2F1_RB is further decomposed in three different modules containing the proteins RB, E2F1, and E2F6.
A considerable literature describes the acylation of isolated tRNA modules containing the acceptor stem [ 19, 20, 55, 56].
The two modules containing the integrase (pICH14011) and the 5′ module (pICH15879) that mediates cytosolic accumulation were coinfiltrated along with the 3′ module [ 24].
These include the expression modules containing the promoters of AtDMC1 and MS5 (Table 1), supporting the reliability of the GFP reporter system.
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