Sentence examples for modules by determining from inspiring English sources

We identified putative homolog modules by determining collections of genes sharing high protein sequence similarity.

Here, we present evidence that support our hypothesis and further illustrate the applied power of Reporter Features in identifying responsive biological functional modules, by determining Reporter Gene Ontologies, Reporter Transcription Factors, Reporter Proteins and Reporter Complexes for yeast and human transcriptional datasets.

To test whether transcriptional changes of the 27 identified modules associate with chronological age, an expression profile for each module was constructed by determining the mean expression of the genes within a detected coexpressed PPI module per individual.

To compare the performances of unsigned and signed WGCNA in identifying gene groups that are important for the regulation of the pluripotent state, we defined gene modules in unsigned and signed networks and assessed module function and importance by determining gene ontology terms associated with each module and examining module membership of genes known to play a role in ES cells.

Since we assume that genes in a module are involved in the same biological process, the predicted modules and clusters were validated by determining if the interacting nodes (genes) are enriched for any Gene Ontology (GO) biological processes using the BiNGO plugin.

Overlap of top-scoring modules with results with GSEA results was evaluated by cross-validating the top 10 GSEA gene sets ranked by NES with significantly overrepresented pathways in our modules (as determined by analysis of functional annotation using ConsensusPathDB).

One factor indicating the general fulfillment of the four survey modules was determined by factor analysis.

For all three groups, the difference in prevalence of interaction across modules was determined by a gradient in interaction intimacy (i.e. host tree specialization), driven by host tree traits.

The specificity between modules is determined by the physicochemical complementarity of their interacting surfaces.

The overlapping of modules between PAG and Cortex and between WGCNA- and MCLUST- produced modules was determined by all-against-all pairwise comparisons with a custom perl script.

The statistically significant functional modules are determined by applying a fast network-clustering algorithm (SCAN: a Structural Clustering Algorithm for Networks).