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Different modules are indicated by means of different colors (see text).
Using the rules described in the text, an in silico proteome is obtained (a) displaying all features observed in real protein interaction networks, including modularity (modules are indicated by different colors).
Modules are indicated by the color bands below the dendrogram.
Therefore, the boundaries of the modules are indicated by molecules or nodes of high connectivity, where bottlenecks in the signaling network may occur.
The strength of the correlations between traits (health states or individual corals) and gene coexpression modules are indicated by the intensity of color.
TR annotation (locus name, gene name and description), first time point of differential expression, predicted influenced modules and the enriched functions of those modules are indicated.
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Biological function of the individual modules was indicated by testing for over-represented Gene Ontology categories as described below.
The participation of an entity in various modules is indicated in the protein's annotation callout by a link which leads to a separate module map(s).
Data processing was done by in-house python (version 2.6) scripts, except where the use of other software modules is indicated.
Another member of the research team analyzes the qEEG and informs J.O. which of the three neurofeedback treatment modules is indicated according to the protocol (see Figure 2).
The set of phenotypes associated with the genes in each module are indicated in the middle column.
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cycles are indicated
components are indicated
schedules are indicated
models are indicated
modes are indicated
nodes are indicated
clusters are indicated
samples are indicated
sticks are indicated
simulations are indicated
modules are described
modules are stored
modules are grouped
modules are supplied
modules are calculated
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com