Sentence examples for module we list from inspiring English sources

For each module we list the top enriched GO terms.

By hunting in the module of interest for transcriptional regulators (DNA binding transcription factors and co-factors), or asking the related question "which transcriptional regulator has the highest absolute, average correlation to all the genes in the module?", we generated a ranked list of regulators predicted to control the processes in question.

For top-scoring modules, we queried the list of genes in the module using overrepresentation analysis.

For the Blue and Yellow modules, we selected gene lists of 500 genes with module membership p-values smaller than 10-22 and corresponding local false discovery rates (q-values) smaller than 10-5.

Based on the annotated genes in the WGCNA modules, we obtained modest lists of orthologous hub genes for PMT responsive to iron depletion (number of the genes: 16) and SYW to copper toxicity (16), and shorter lists for PMM (10) and SYG (6).

Although this is only one aspect of our analysis, we compared our module list to modules found by other studies of the CB map (Bandyopadhyay et al., 2008; Pu et al., 2008; Ulitsky et al., 2008).

We conducted gene ontology analysis and miRNA prediction based on the module gene list.

The proposed system includes an image detection and recognition module, safety message broadcasting module, vehicle list construction module and the user interface module.

Meanwhile, 21 of the 30 genes were found in the module gene list.

The interventions were costed using the costing module in LiST, using the most recently available data.

In contrast, 18 of the 30 input genes were included in our module gene list.