Sentence examples for module detection analysis from inspiring English sources

In such applications a standard marginal module detection analysis will be preferable.

The same module detection analysis was performed on the human and mouse datasets by Xue et al. [ 19].

Since module genes tend to be highly connected, we restricted the module detection analysis to genes that had relatively high connectivity.

Thus, for the purpose of module detection, restricting the analysis to the most connected genes does not lead to major information loss for the key points of this presentation.

The topological overlap matrix (TOM) is the central starting point for network modules detection and analysis and each element (ωij) represents a measure of similarity between two nodes in the same network.

Being a Cytoscape app, iCTNet2 also provides flexibility to conduct further analysis on the generated networks for further exploration, such as disease gene prediction, module detection, and topological network analysis.

In the previous study, enrichment analysis, followed by Cis-regulatory module detection in combination with network analysis was done.

Advances in module detection algorithms have elevated microarray analysis to much higher levels than simple identification of differentially expressed genes and Gene Ontology (GO) enrichment analysis.

Module detection followed by a meta-analysis on chronological age identified fifteen consistently coexpressed PPI modules associated with chronological age, including a highly significant module (P = 3.5 × 10−38) enriched for ' T-cell activation' marking age-associated shifts in lymphocyte blood cell counts (R = 0.603; P = 1.9 × 10−10).

A comprehensive comparative analysis of methodologies for module detection based on modularity maximisation shows that our approach outperforms previously reported methods.

It can perform various aspects of weighted correction of co-expression network analysis including network construction, module detection, gene selection, calculations of topological properties, data simulation, visualization, and interfacing with external software.