If a hash value and a module name are not found in the saved list, the module is classified as a newly added module and its signature is checked again.
Similarly, in the ICBT group, the module was classified as finished when the homework had been completed.
After that, each module was classified into a specific developmental stage and most of the genes in each module showed consistent overexpressed behavior in corresponding developmental stage.
Phages in which a known lysogeny module was annotated were classified as putative temperate phages, phages without a known lysogeny module were classified as putative virulent phages [ 38, 39].
Standby modules are classified as hot, warm, or cold, depending on the level of service restoration [24].
The CBM modules are classified into three, namely type A, type B, and type C, to define CBMs in terms of their binding specificity.
Fifteen cohesin modules are classified as type II and 34 cohesin modules are classified as type I.
In addition, recurrent modules were classified by gene-diversity to measure the extent to which multiple genes within each module were up-regulated.
Based on these two diversity measures, modules were classified into six possible idealized patterns to enable further investigation of distinct module classes (see Methods).
Most (14 out of 20) of the proteins carrying carbohydrate esterase (CE) modules were classified as multifunctional proteins (Table 3), which will be discussed in the subsequent section.
