Sentence examples for modified to output from inspiring English sources

This code was uncommented and modified to output the distance matrix to a specific text file.

Instead the phylogenetic search program PSODA [ 29] was modified to output every tree that it was going to perform a TBR rearrangement on, and every 100th rearrangement so produced.

Sequence complexity was calculated using Matlab routine kolmogorov (provided by Stephen Faul, Radisens Diagnostics, code available at the Mathworks website), modified to output the absolute number of Lempel Ziv operations, not normalized for the sequence length (Kaspar and Schuster, 1987).

The other three alignment programs were also modified to output distance measures to 25 decimal places: Clustal Omega: line 327 of clustal/symmatrix.c; Mafft: line 2643 of io.c; Muscle: line 59 of fastclust.cpp.

While AMET was designed to work specifically with MM5, WRF and CMAQ model output, it could easily be modified to work with output data from other meteorological and air quality models.

The source code was modified to customize the output format of the RCHH list.

This would mean that our visualisation software (PartitionView) could be modified to process the output file.

Lexical parsers can be modified to provide an output that preserves the intended sense of the term as used in its context.

D iamund can use either of two efficient alignment systems for this step: MUMmer [ Delcher et al., 1999; Kurtz et al., 2004], a suffix tree-based algorithm that rapidly finds exact matches; or Kraken [ Wood and Salzberg, 2013], a fast sequence classifier that we modified to provide the output needed by our system.

The system could be modified to create a biphasic output; however, this output came at the cost of many orders of magnitude loss of maximum output signal strength, meaning these modifications were practically impossible.

The file bwtsw2_aux.c was modified to generate an alternative output, which presents a lightweight tab-separated output format containing only the necessary data required by DeconSeq (query identifier, reference identifier, query coverage and alignment identity).