Sentence examples for modification in pLink from inspiring English sources

Then, add the variable modification in pLink 2 search and see if it helps.

In our sample, the smallest segment detected with PLINK was 3.8 c M long, almost twice as our threshold of 2 c M. With respect to genotyping errors, a modification of PLINK has been proposed in order to include genotyping confidence scores into the IBD inference process, which could improve IBD inference.

Case-Control association of SNPs to MM were analyzed in PLINK using the --assoc command.

Subsequent analysis was performed in PLINK.

SNP analyses were performed in PLINK (http://pngu.mgh.harvard.edu/purcell/plink/) [26].

Possible population stratification that could influence association analyses was detected using multidimensional scaling analysis implemented in PLINK (http://pngu.mgh.harvard.edu/purcell/plink [30]).

Hardy-Weinberg equilibrium of SNPs was determined by using the –hardy command in PLINK v1.07.

Population stratification assessment was performed using PCA of eigenstrat and MDS as implemented in PLINK.