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Lastly, the rhizarian Thaumatomonas sp. branched with alveolates and stramenopiles with weak to moderate support values, consistent with a previous study based upon >100 concatenated protein sequences [14].
Amanita verna, which has a white basidioma, is sister to A. phalloides and A. subjunquillea with moderate support values.
In addition to a monophyletic Clinidae, all three analytical methods recovered two diverse clades with moderate support values.
Glaucophyte gnd genes formed a monophyletic group with green plants, Euglenida, and Stramenopiles with moderate support values (Bayes|ML|MP = 100|64|59).
The two African genera, Bicyclus and Hallelesis, clustered with high to moderate support values (PP = 0.99, BS = 61 %) as sister clades in all analyses.
As the moderate support values have been calculated on the basis of the full-length dataset, they might be due to missing data in one or more of the syndermatan lineages sampled.
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A clade consisting of all homologs from alpha proteobacteria was recovered to be the closest sistergroup of the Clade E with a moderate support value (0.73/54) with all the homologs of other diverse bacteria being its outgroups.
However due to the moderate bootstrap support values, we cannot presently propose a solid conclusion on the timing of this duplication.
Mitochondrial genes (12S rRNA and Cytb) recovered a sister clade consisting of Spalacinae and Rhizomyinae with moderate bootstrap support values of 63% or 71% depending on phylogenetic approaches, while Myospalacinae is basal relative to the two additional subfamilies with a strong support values of 100% [ 12].
The first sub-cluster separated the northern Turkish population (TU1) with moderate support (bootstrap value 54 %).
However, internal nodes connecting different genera received only moderate to low support values.
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