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Using IMPUTE2, SNP genotypes up to 800K were imputed with low allelic error rate (0.79% genome-wide) from 50K genotypes, and with moderate error rate from 3K (4.78%) and 7K (2.00%) genotypes.
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If moderate error rates can be tolerated in cases such as QTL studies involving frequent alleles [44], or identical by descent-based analyses when considering a large number of markers [38], conversely low error rates can be dramatic in association-mapping studies [49].
Results showed that, at low and moderate error rates, ustacks correctly reconstructed nearly all (86%) known loci.
Estimates for survival and SCC appear less powerful than milk production traits with moderate error rates, again likely reflecting lower heritabilities for these traits.
50K specific genotypes were imputed with moderate allelic error rates from 15K (2.85%) and 25K (2.75%) genotypes.
The results show that effective screening, that is, high power with moderate type I error rate and false discovery rate, can be achieved through suitable choices for the number of design support points and experiment size.
The paper shows that, when the position of the sensors in unknown, and for moderate values of the packet error rate between links, the NC-based protocol attains a higher packet delivery rate than a traditional protocol with a trade-off paid in terms of end-to-end delay.
There is some evidence of inflation of the false-positive error rate for moderate levels of population structure.
The numerical results show that the proposed frequency-domain equalization schemes significantly outperform conventional linear minimum mean square error-based equalizers in terms of bit error rate performance with moderate increase in computational complexity.
In general, to prevent inflation of the type I error rate, loci having moderate frequencies of alleles (e.g., ≥10%) should be used in this test.
For example, Ref. [14] showed that even at moderate speeds of 50 60 km/h the packet error rate of an IEEE 802.11a channel exceeds 10%%.
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