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Exact(9)
The nucleotide substitution and molecular clock models were unlinked for all loci, and tree models were unlinked for all nuclear genes but linked for the two mitochondrial genes.
Parameter values both for clock and substitution models were unlinked across partitions.
In addition, the clock and tree models were unlinked for all locus partitions.
Substitution models were unlinked and clock and tree models were linked among partitions.
Substitution and clock models were unlinked and the dataset was partitioned by gene following models of evolution generated by MODELTEST v3.7.
Substitution and clock models were unlinked among partitions and a birth-death speciation process on branching times was specified as the tree prior for each analysis [ 22].
Similar(51)
For all character sets the gamma shape parameter, proportion of invariable sites, character state frequencies, and substitution rates of the GTR + G + I model were unlinked.
Codons were grouped into three partitions and the substitution model was unlinked across codon positions.
To examine the potential systematic errors caused by model misspecification and improper data partitioning strategies, we applied a series of data partitioning strategies, and homogenous versus mixed models (parameters were unlinked across partitions).
Posterior probability distributions of node ages were obtained for the 3-gene alignment with analyses performed in a concatenated and partitioned framework (all model parameters were unlinked across partitions).
Models and partitions used are summarized in Table 5. Model parameters were unlinked between data sets.
Related(20)
samples were unlinked
models were related
models were associated
models were independent
models were gone
models were launched
models were wrong
models were analyzed
models were sent
models were interspersed
models were cut
models were discontinued
models were veiled
models were based
models were trained
models were put
models were sold
models were applied
models were tested
models were powered
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