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Based on comparative molecular dynamics simulations using explicit and implicit solvent models, we studied the dynamic properties of both protein and water.
Using these models we studied kinetic characteristics of plastocyanin-photosystem 1 and ferredoxin-photosystem 1 complex formation at a variety of ionic strength values.
Using the models, we studied the heat transfer within the storage in detail, which enabled us to present how to adapt the storage geometry and PCM properties to cover a broad range of applications.
Using these models, we studied (1) the structural relationship between the ligand-binding domains (LBDs) of ERs and ARs of human and medaka, and (2) whether medaka ER and AR can be potential models for studying the ligand-binding activities of various agonists and antagonists of these receptors by docking analysis.
While nearly all the quantum simulation models we studied were sloppy (the exception being models with complete disorder, i.e., random parameters), in some cases the influential CPD is complex, and engineering robust AQS for these models could be challenging.
In each of the three models we studied (see Methods), we assume a maximum distance dmax between the two bound factors, beyond which there is no interaction.
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Through a series of simple separation of powers models, we study one such tactic, employed by both Democratic and Republican presidents: the use of signing statements, which purport to have status in the interpretation of statutory meaning.
Having obtained the reduced-order models, we study their step and impulse responses, and compare them to those of the original full-order model.
For these infinite dimensional models we study finite speed of propagation of information, well-posedness of the semigroup, time behaviour of the derivatives and strong ergodicity problem.
For various models, we study their estimation as well as prediction properties.
In the next section, we will describe the two models we study, and then use them to introduce field theoretic language.
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