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The complement of shared and unique reactions between the three Pseudomonas models is visualized as a Venn diagram in Figure 4.
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Optimal virtual trails generated from the models are visualized and animated as if they were actual trails of individual users in order to highlight behavioural patterns that may foster social navigation.
The models were visualized using Rasmol tool.
Models are visualized by projecting virtual beams of light through these volumes, and the light rays are affected by the voxels based on user-defined rules.
3D models were visualized using Chimera [20].
Homology models were visualized and molecular graphics images produced using the UCSF Chimera package from the Resource for Biocomputing, Visualization, and Informatics at the University of California, San Francisco (supported by NIH P41 RR-01081)[16].
Models were visualized using MacPyMOL (DeLano Scientific LLC).
Models were visualized and analyzed using the program PyMOL.
Structural models were visualized with the VESTA and CrystalMaker packages.
The models were visualized, and the disulfide bonds were examined using UCSF Chimera.
These models were visualized, and their structural features measured, with DeepView (Swiss-PDB Viewer) 4.0.1 [ 20].
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