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Beyond HMMs, there are more powerful (though less efficient) classes of probabilistic models for sequence analysis.
Currently, I work on analyzing and improving deep learning models for sequence generation.
These extensions are followed by work regarding inherent statistical bias in models for sequence evolution.
Finally, I present work related to the study of bias in site-independent models for sequence evolution.
An important unsupervised method of discovering HMM models for sequence labeling is the forward-backward (or Baum-Welch) algorithm.
Nevertheless, we think that affects combined with other features extracted from tweets, location-specific feature selection (e.g., our findings from cross-correlation analysis), as well as deep neural network models for sequence prediction can boost prediction accuracy, and even forecast ILI dynamics several weeks in advance.
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Previous network models for sequences and memory emphasized specialized architectures in which a principled mechanism is pre-wired into their connectivity.
This test indicates the prediction efficiency of the models for sequences independent of the training.
In addition, recent years have seen the upcoming of improved force fields to calculate non-bonded interactions in macromolecular three-dimensional structures, and better strategies to produce plausible three-dimensional structural models for sequences with unknown structure [6] [9].
Recently, computational models for sequence-based prediction of nucleosome positioning in Saccharomyces cerevisiae were proposed.
All sequence comparisons were run on a Paracel Genematcher using the Smith-Waterman [ 55] algorithm for pairwise sequence comparisons and Hidden Markov Models for sequence-to-profile comparisons.
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