Sentence examples for models coding for from inspiring English sources
Several gene models contain regions of unresolved sequence (e.g. N nucleotide designations) in middle of gene sequence (e.g. gene models coding for the 293291 or 298293 proteins) and/or unusually long introns regions (e.g. the model coding for the 298293 protein).
We searched the P. trichocarpa genome sequence for all the gene models coding for LIM domain proteins.
After expert annotation of the AA1 CAZy family, we identified five gene models coding for predicted laccases (Additional file 2: Table S8).
This comparison showed that there is a clear correlation between complete genes in C. cinerea and M. perniciosa gene models coding for proteins smaller than 300 aa.
We excluded several gene models coding for proteins containing only one LIM domain linked to either a cytochrome P450 domain or an ubiquitin interaction motif and focused on gene models with two LIM domains.
A total of 14,268 gene models coding for proteins were annotated using MAKER 2. RNA sequencing data as well as proteomes of related species were used for gene model prediction in MAKER 2. Descriptive names were assigned to 7,385 gene models based on homology to the Uniprot database where the best hit with E value below 1 × 10− was used.
For several genes, the presence of alternative transcripts resulted in an uncorrected model (e.g. the model coding for the 247279 protein) indicating the method may not identify multiple splice variants when more than one variant is simultaneously present in dataset.
A different calculation would require a change in the model coding for such calculations but would not invalidate the model itself.
Genotypes were coded according to the number of variant alleles as none, one, and two to test for a codominant model; coding for a recessive and a dominant model was also performed.
Legislative leaders joined Attorney General Andrew M. Cuomo to announce the proposal, which is based on a so-called model code for doctor ranking that Mr. Cuomo has persuaded top insurers to adopt.
The JCSS is developing a model code for full probabilistic design.
