Sentence examples for modelled the structures from inspiring English sources

Based on these experimental structures, we now have modelled the structures of the other human/mouse PCs.

To understand how pH might affect the protonation of residues involved in Cu release, we modelled the structures of HMA6 and HMA8 and evidenced differences in the electrostatic potential of their Cu-releasing cavities.

To obtain insights of the structure of plant CCCH zinc finger, we have taken the coordinates of the TIS11D CCCH domain complex and modelled the structure of the interaction of the AtC3H14 (AT1G66810) CCCH domain peptide with the RNA nonamer (5'-UUAUUUAUU-3'), using the Swiss-Model programs [ 70].

With this method, the regression model is estimated using ordinary least squares, but the standard errors are estimated without imposing a constraint (either assumed or modelled) on the structure of the errors.

Thus, based on the modelled structures, the mechanism of protein-biomolecule interactions at the active site seems to be completely different for the three proteins, and then, we hypothesize that different recognition sites should be present in the three proteins.

The rrnS and rrnL secondary structures of a reference Metacrangonyx mitogenome have been modelled based on the structures determined elsewhere in Artemia and sequence conservation within Metacrangonyctidae mapped on the obtained structures.

The modelled structures of the three proteins show the well-known TRX fold.

A comparison of the modelled structures of the C-domains in the apoprotein and p[NH]ppA-bound states revealed domain motions induced by p[NH]ppA binding.

A phenetic analysis of RMSD distances obtained by superposition of the modelled structures revealed that structural variability in the TIR domain of all three receptors was lower than ECD variability (see Additional file 2: Figures S4d, S4e and S4f).

Using latent variables has some effect on the modelled (co variance structures; because the latent variable model uses less parameters than the full (co variance matrix, the (co variance structure is somewhat restricted, similar to using only the main principal components in a principal component analysis or frequentist factor analytic model, e.g., [ 34].

We finally used the modelled structures of the S. mansoni glucose transporters to biophysically (i) analyze the dynamics of key residues during glucose binding, (ii) test glucose stability within the active site, and (iii) demonstrate glucose diffusion.