Sentence examples for modelled structures and from inspiring English sources
The stability of the modelled structures and their complexes was always evaluated and controlled by molecular dynamics.
These are modelled structures and so should be treated with some caution.
The modelled structures and sequences can be downloaded in PDB and FASTA formats, respectively.
However, these results are specific to the modelled structure and the input parameter set.
Additional file 10: Contains the modelled structures files of Vv_LIDH and Vv_SDH and additional illustration figures.
Hence, these findings and modelled structures can be used to design HLA-DRB1 binding peptides to overcome low prediction accuracy of HLA class II binding peptides.
We have previously shown that mds can provide good agreement between modelled structures of ovine PrP and those derived by experimental studies [ 26].
A phenetic analysis of RMSD distances obtained by superposition of the modelled structures revealed that structural variability in the TIR domain of all three receptors was lower than ECD variability (see Additional file 2: Figures S4d, S4e and S4f).
Modelled structures of mortalin, Bcl-2 and Bcl-xL were used to perform docking analysis with each other.
The VADAR web-server was used to predict the structural parameters of the modelled structures [47] (http://redpoll.pharmacy.ualberta.ca/vadar/).ualberta.ca/vadar/
On the other hand, the SNP effects on protein functions were inferred by modelled structures because the molecular modelling method has been found useful for estimating the effects of the substitution of amino acid residues on protein function.
