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Summary: Morpheus is a modeling environment for the simulation and integration of cell-based models with ordinary differential equations and reaction-diffusion systems.
It also describes the modeling environment for software and hardware (MESH) environment for hardware and software modeling.
A company called Adaptive Computing started in 2001 as a scheduling and modeling environment for large-scale, high-performance computing environments.
A graphical user interface, Piraña, was developed that offers a complete modeling environment for NONMEM, enabling both novice and advanced users to increase efficiency of their workflow.
Using a Cellular Automaton (CA) as a modeling environment for discrete systems with local dynamics, we study the boundary conditions for such pattern-dependent genetic erosion.
A comparative transient simulation analysis for domestic buildings with a floor-embedded heating system coupled to a modern air source heat-pump (ASHP) has been carried out using the TRNSYS numerical modeling environment for various UK locations.
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Methodologies, like co-simulation which allows for parallel simulation at different time-scales in different modules, and modeling environments for integrative models including different types of equations (ODEs, PDEs, SDEs etc) were discussed and evaluated.
The more comprehensive modeling environments for systems biology, such as CellDesigner [ 3], COPASI [ 4], Virtual Cell [ 5] and others, have been gradually enriched and now offer a wealth of features for modelers.
We introduce here a novel tool, the interactive vascular modeling environment (IVME) for editing, manipulation, quantification, and labeling of cerebrovascular models.
The "Literature review" section presents key design principles guiding the integration of CT and science education in CTSiM, and reviews known challenges and scaffolds for CT-based environments and learning-by-modeling environments for science.
There has been progress in this direction more recently, using finite element algorithms, producing modeling environments suitable for investigating time- and shape-dependent changes in patterns generated by reaction-diffusion systems of biological interest [42], [43].
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