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The proposed two dimensional flow and sediment transport modeling approach implemented with a variety of inflow conditions can provide guidance to decision-makers when considering implementation of potential modification plans, especially as they relate to competing management strategies of large water bodies, such as the modeling area in this study.
The list of statistically significant differentially expressed genes was obtained by applying the linear modeling approach implemented in lmFit package for Python and the empirical Bayes statistics implemented by eBayes from the limma R package (http://bioinf.wehi.edu.au/limma/; [ 16]).
We generated an ENM for A. transcaspicus using the robust modeling approach implemented in the program Maxent v3.1 [31].
Instead of the more elaborate modeling approach implemented by Merrill et al. (2003), a simple model structure for ClO4− was constructed, similar to the approaches reported by Crump and Gibbs (2005) and Lorber (2008).
The package adopts the linear modeling approach implemented by lmFit and the empirical Bayesian statistics implemented by eBayes.
For the two biological replicates on each four experiments we applied on the pretreated results the linear modeling approach implemented by lmFit (using each replicate as independent variable) and the empirical Bayes statistics implemented by eBayes both from the limma R package [ 20].
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The population PK model building process was performed using the nonlinear mixed-effects modelling approach implemented in the software NONMEM™, version V, level 1.1.
Statistical analysis of data was performed using the linear models approach implemented in limma, using the M values for each array as the dependent data.
Results are compared with numerical analyses carried-out with the fiber model approach implemented in a commercial software (SAP2000), showing the accuracy of proposed method.
Two synthetic examples are provided to quantify the impact of the gas phase and verify the proposed modelling approach (implemented in MODFLOW-USG) against rigorous multiphase flow simulations (undertaken using ECLIPSE∗).
We also used the nested models approach implemented in the "L-mode" of IMa (using 5×105 trees) to statistically test the hypothesis of zero gene flow for both m-parameters as compared to the full model containing all parameters using log-likelihood ratio tests.
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