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This survey of computational molecular biology covers traditional topics such as protein structure modeling and sequence alignment, and more recent ones such as expression data analysis and comparative genomics.
"Equivalent" subdomain elements of structure were designed on the basis of the tertiary structure of Pol β and the corresponding regions of Pol X were inferred from homology modeling and sequence alignment analysis.
RNNs are well known for their long memory and are widely used for dynamic system modeling and sequence prediction.
Based on homology modeling and sequence analysis, we chose residues in the three functional domains of the enzyme to assess their contributions to ligand binding and catalysis using site-directed mutagenesis.
FF initiated and coordinated the work and participated in the structural modeling and sequence analyses.
Interestingly, a disulfide bond was predicted between the cysteine residues at positions 129 and 182 for DctP_00983 by homology modeling and sequence analysis.
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Rux, J., Kuser, P. & Burnett, R. Structural and Phylogenetic Analysis of Adenovirus Hexons by Use of High-Resolution X-Ray Crystallographic, Molecular Modeling, and Sequence-Based Methods.
Rux, J. J., Kuser, P. R. & Burnett, R. M. Structural and phylogenetic analysis of adenovirus hexons by use of high-resolution X-ray crystallographic, molecular modeling, and sequence-based methods.
Assessment of the probability that a given mutation of one codon into another would produce a viable variant member of the quasispecies is based on the analysis of data from the genomic sequences, the protein sequence homology searches, and structural modeling and sequence-structure conservation analysis of corresponding protein regions.
The Kahak section of the Qom Formation in the Urumieh-Dokhtar magmatic arc has been studied, in order to determinate its microfacies, depositional model and sequence stratigraphy.
The main goal of CAPP system is to derive manufacturing features and machining operations from a design model and sequence the machining operations of the part in a feasible (by some technological constraints) and effective (by some economical standards) order.
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formats and sequence
modeling and simulation
modeling and rendering
modeling and regularization
modeling and optimization
modeling and estimation
modeling and quantization
modeling and coloring
modeling and path
modeling and visualization
modeling and forecasting
modeling and algorithm
modeling and theory
modeling and testing
modeling and analysis
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