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The modeled structure of protein Model-50 was validated by PROCHECK, ERRAT, ProSA, and QMEAN.
We also compared the structure of Pla and the modeled structure of Epo to analyze the structural variations that could rationalize the different proteolytic activities.
9, 10 The modeled structure was evaluated using PROCHECK, a protein structural quality analysis software.
The modeled structure was validated by multiple analysis tools.
The modeled structure was stabilized using Molecular Dynamics simulations.
The modeled structure was refined using energy minimization.
Even though the modeled structure of WT-QR provides interesting insights into the effects of the two mutations, the results need to be confirmed by experimental work.
(B) Ribbon and surface representations (left and middle panels) of the modeled structure of LDHA with NADH and pyruvate are shown.
The modeled structure reveals that only a minor part of the M1 protein is surfaced exposed when bound to the human plasma proteins.
EF0.01(modeled structure) Ave.
(B) Modeled structure of PXL2LRR-CLE42 complex using as the PXYLRR-CLE41 template.
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