Sentence examples for model was minimized from inspiring English sources

Using the Schrödinger's Maestro software [ 75], each predicted 3D model was minimized, prepared, refined and re-minimized – minimization was used to remove steric clashes.

This model was minimized by using 500 steps of energy minimization under conjugate gradient algorithm in order to optimize side chain conformations and avoid sterical clashes according to the commonly used procedure [15] [19].

This model was minimized by using 500 steps of energy minimization under conjugate gradient algorithm to optimize side chain conformations and avoid sterical clashes according to the commonly used procedure [29], [58] [59].

The model was minimized according to our recent papers [29].

The model was minimized by 2000 steps of steepest descent and 1000 steps of conjugate gradient and then equilibrated at the desired temperature and pressure for 50 ps, with all atom restraints except hydrogens, followed by 1 ns free of any atomic restraints.

Finally, the model was minimized using GROMACS [ 97, 98] and its stereochemical quality was evaluated using PROCHECK [ 99].

The goal of the model was minimizing transportation time and it was formulated as a MILP and solved by Tabu search for large instances.

The objective function of this model was minimizing the external and internal transportation costs and holding costs of inventory in distribution centers.

When estimating kinetic parameters of the models, the goal is to calculate appropriate parameter values so that errors between experimental and theoretical data (based on mathematical model) are minimized.

By using the model of an aircraft fuselage discussed in Part I, an analysis is presented which demonstrates that the total acoustic potential energy (Ep) within the cylindrical model is minimized by a unique vector of secondary force inputs.

In the developed approach the residual between measurement results obtained with static experiments and results obtained with an FE model is minimized by adapting the stiffness properties in the FE calculation.