Sentence examples for model the abundance from inspiring English sources

In contrast, in a typical metagenome simulation, the clones have to be sampled from many genomes of varying length, copy number (e.g. to model the abundance of plasmids versus the organsim genomes) and abundancies.

We utilize a recently completed ground reference vegetation data set extending over 12,000 km2 in Denali National Park and Preserve, Alaska to model the abundance of usnic lichen and other forage vegetation groups.

This experiment indicates that as the number of annotated splice variants for each gene grows, quantification methods that explicitly model the abundance of each isoform will not be computationally feasible.

In this model, the abundance of each protein is lognormal-distributed and depends on a few parameters that determine the mean abundance and the extrinsic (correlated) and intrinsic (uncorrelated) noise in protein abundance (details of the model discussed further below) (Elowitz et al., 2002).

In the linear interaction model, the abundance value of a gene at time t is treated as a weighted sum of the abundance values of all genes in the profile from the previous time point, t - 1, i.e., e n (t ) = w n T e (t − 1 ).

These equations model the abundances of species and can be seen as the deterministic counterpart of the stochastic master equation.

Although factorized PSGs only indirectly model the abundances of individual isoforms, they enable an efficient alternative for quantification.

Two algorithms, an algebraic function model and a rule-based model, were developed with an aim to model the abundances of M. aeruginosa in Nakdong [ 54].

Being interested in all things Central Park, I retrieved the research paper the above news article was based on from Historical Biology, volume 22, 1 27, "Giants on the landscape: modelling the abundance of megaherbivorous dinosaurs of the Morrison Formation (Late Jurassic, western USA)" (http://www.informaworld.com).

We next modeled the abundance of phage psbA transcripts using the decay constant (dRpsbA) calculated above for host psbA transcripts.

If the relationship between two genes is restricted to the class of linear models, the abundance value of a gene is treated as a weighted sum of the abundance values of other genes.